The cumulative observed model quality of the top ranked models produced by each method. The McGuffin group methods are indicated in bold. The ModFOLD servers did not participate in the TS category, however the cumulative scores for the top ranked models are are shown for comparison with server methods. The McGuffin results are from our manual TS predictions, which were made using a beta version of the ModFOLD v 2.0 method to select models. Methods are ranked by the combined score, which is the mean of the TM-score, MaxSub and GDT-TS scores.
Method	TMscore	MaxSub	GDT	Combined
ModFOLDclust	87.642	74.452	78.643	80.246
Zhang-Server	87.455	74.170	78.211	79.946
ModFOLDv2_0	86.992	73.974	78.070	79.679
pro-sp3-TASSER	85.360	71.514	75.737	77.537
RAPTOR	84.572	71.714	75.785	77.357
METATASSER	84.793	71.328	74.854	76.992
Phyre_de_novo	83.633	70.266	74.931	76.277
MULTICOM-REFINE	83.725	70.218	74.774	76.239
MULTICOM-CLUSTER	83.516	70.257	74.596	76.123
HHpred5	83.519	70.154	74.404	76.026
MUProt	83.315	69.868	74.360	75.848
BAKER-ROBETTA	83.463	69.587	74.276	75.775
HHpred2	83.406	69.529	74.006	75.647
HHpred4	83.297	69.510	73.917	75.575
FAMSD	83.042	69.131	73.642	75.272
MUSTER	82.978	68.818	73.389	75.061
MULTICOM-RANK	82.297	68.866	73.497	74.887
GS-KudlatyPred	82.126	69.150	73.344	74.873
SAM-T08-server	82.148	68.410	72.821	74.460
Pcons_multi	82.084	68.417	72.812	74.438
MULTICOM-CMFR	81.963	68.298	72.922	74.394
COMA-M	81.575	67.876	72.633	74.028
PS2-server	81.264	68.003	72.540	73.935
3DShot2	81.639	67.683	71.353	73.558
FFASsuboptimal	80.252	67.298	71.584	73.045
Phyre2	80.623	66.395	70.978	72.666
FEIG	80.349	66.213	70.327	72.297
PSI	80.321	65.855	70.579	72.252
COMA	79.838	65.811	70.329	71.993
FFASstandard	79.010	66.381	70.429	71.940
Phragment	79.515	65.230	70.092	71.612
FFASflextemplate	78.635	65.692	69.934	71.420
nFOLD3	78.528	65.580	69.608	71.238
mGenTHREADER	78.104	65.383	69.727	71.071
Poing	78.976	64.431	69.422	70.943
Pcons_dot_net	78.037	65.201	69.423	70.887
ModFOLDv1_1	77.832	64.956	69.260	70.683
circle	78.315	64.428	68.959	70.567
3D-JIGSAW_V3	77.871	64.148	69.184	70.401
CpHModels	77.369	64.975	68.816	70.387
3D-JIGSAW_AEP	77.363	64.370	68.762	70.165
BioSerf	77.688	63.839	68.818	70.115
GeneSilicoMetaServer	77.106	64.239	68.448	69.931
FALCON	77.624	63.041	68.152	69.606
fais-server	77.260	63.405	67.752	69.472
SAM-T06-server	77.183	62.389	67.814	69.129
GS-MetaServer2	75.846	63.625	67.509	68.993
Pcons_local	75.266	62.819	66.841	68.309
SAM-T02-server	74.271	62.665	66.474	67.803
pipe_int	74.518	61.687	66.089	67.431
keasar-server	73.183	61.003	65.590	66.592
3Dpro	72.425	59.349	63.794	65.189
FALCON_CONSENSUS	72.768	57.384	62.859	64.337
FUGUE_KM	71.357	58.330	63.206	64.298
forecast	69.451	55.693	60.748	61.964
ACOMPMOD	68.651	54.978	59.910	61.180
Frankenstein	66.984	55.523	59.782	60.763
panther_server	67.759	55.202	58.833	60.598
MUFOLD-Server	68.222	51.807	58.334	59.454
Pushchino	64.020	53.980	57.590	58.530
Distill	66.119	50.554	55.015	57.229
rehtnap	63.127	51.181	54.941	56.417
LEE-SERVER	60.806	52.362	54.633	55.934
LOOPP_Server	62.029	49.660	54.495	55.395
Fiser-M4T	56.117	48.827	50.743	51.896
FOLDpro	54.966	39.860	46.104	46.977
YASARA	48.543	42.384	44.357	45.094
mariner1	47.146	33.167	39.015	39.776
OLGAFS	40.905	31.517	35.950	36.124
huber-torda-server	39.163	32.279	35.262	35.568
MUFOLD-MD	39.293	26.787	32.879	32.986
RBO-Proteus	35.244	23.622	29.343	29.403
schenk-torda-server	18.788	9.662	14.169	14.206
mahmood-torda-server	11.305	6.704	9.932	9.314
Jiang_Zhu	3.611	3.009	3.266	3.295
BHAGEERATH	1.374	1.204	1.549	1.376
DistillSN	1.286	0.479	0.850	0.871
SHORTLE	0.863	0.843	0.848	0.851
LEE	0.849	0.769	0.799	0.805
xianmingpan	0.751	0.704	0.694	0.716
test_http_server_01	0.787	0.625	0.686	0.699
HCA	0.413	0.246	0.351	0.337